BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034E01SP1|AL429906
(836 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1098 1212 0.0
>3x_Contig1098
Length = 4979
Score = 1212 bits (600), Expect = 0.0
Identities = 759/828 (91%)
Strand = Plus / Plus
Query: 1 tgaaatcattgtatgcaatggttgcagtmccttcttgttgcaagtmatacttacggaaaa 60
||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 3851 tgaaatctttgtatgcaatggttgcagtcccttcttgttgcaagtcatacttacggaaaa 3910
Query: 61 mtttggttagtcgcattaaccatacwaacgtttcaacaaawcwatcaaamttcatttctt 120
|||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||||
Sbjct: 3911 ctttggttagtcgcattaaccatactaacgtttcaacaaatctatcaaacttcatttctt 3970
Query: 121 tgtttagcctttgcwggtcaaagtattccgcatagcattcaaacaatttctcactaactt 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3971 tgtttagcctttgctggtcaaagtattccgcatagcattcaaacaatttctcactaactt 4030
Query: 181 caaaaggaattagawawcccaacgattggacagctttatgaaactcagccatcgttagcg 240
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4031 caaaaggaattagatatcccaacgattggacagctttatgaaactcagccatcgttagcg 4090
Query: 241 taaatragccgttgawatcgttatctacaaaamattttctccattttttaactctcttgt 300
||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4091 taaatgagccgttgatatcgttatctacaaaacattttctccattttttaactctcttgt 4150
Query: 301 ataamgaaatgaattcatttaagtwgacagtaccaaawctagagccaccaaacaagttta 360
|||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 4151 ataacgaaatgaattcatttaagttgacagtaccaaatctagagccaccaaacaagttta 4210
Query: 361 ttagtgattcaattgaacttgtacaaaawttcgacccatcatcattctgtaacaaawtat 420
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 4211 ttagtgattcaattgaacttgtacaaaatttcgacccatcatcattctgtaacaaattat 4270
Query: 421 gcagttcgtctgccgtgagtmtgcccatgtttttcaagtcatggttgttgaaaagctcgg 480
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 4271 gcagttcgtctgccgtgagtctgcccatgtttttcaagtcatggttgttgaaaagctcgg 4330
Query: 481 ttgcgattaagtwatcttgttgttcttgttgggactcttgtgawgctawagaacctgcgc 540
|||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 4331 ttgcgattaagttatcttgttgttcttgttgggactcttgtgatgctatagaacctgcgc 4390
Query: 541 tagawgcggccagtggctgawttttgcgatactgtacttgaggtgccgatgaagactgca 600
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 4391 tagatgcggccagtggctgatttttgcgatactgtacttgaggtgccgatgaagactgca 4450
Query: 601 tagagcgtggtggtggagggtttggggcccttattgagatattttgtggtgaagaatgcg 660
||||||||||||||||||||||||||||||||||| | ||||||| | | || ||||||
Sbjct: 4451 tagagcgtggtggtggagggtttggggcccttattcacatattttctcctcaacaatgcg 4510
Query: 661 gtactgttgctactggatgacctgcagtttgactttgatagtaaacctgttgtggtggag 720
||||| || ||||| || |||| || ||| ||||| ||| ||||||| || | | |
Sbjct: 4511 gtactcttcctactccatcacctccactttcactttcatactaaacctcttctcctccac 4570
Query: 721 cataagttgacatactggcggaactaccattatgggcaggcatttgagccatcaccctgg 780
||||| || ||||||| | |||||||||||||||||||||||| | ||||||||||
Sbjct: 4571 cataacttcacatactcccccaactaccattatgggcaggcatttcacccatcaccctcc 4630
Query: 781 aaggtgcaggtggctgttcatagctcggtacccttggttgagatcttt 828
|| | || | || |||||| |||||||||||||||||| ||||||
Sbjct: 4631 aacctccacctccctcttcatacctcggtacccttggttgacatcttt 4678
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4388
Number of Sequences: 1807
Number of extensions: 4388
Number of successful extensions: 96
Number of sequences better than 1.0e-20: 1
length of query: 836
length of database: 10,358,551
effective HSP length: 16
effective length of query: 820
effective length of database: 10,329,639
effective search space: 8470303980
effective search space used: 8470303980
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 49 (99.5 bits)